FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005395519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005395519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38333692
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGATGTG1013245826.43225181649605No Hit
CACGGTGC966747125.21925360072283No Hit
TTTCCACT921391124.036064671255772No Hit
AGATACAA866281022.598423339969447No Hit
GCGAGGTG1020970.26633750800731637No Hit
CACGGTGA480640.12538317467568738No Hit
TTTCCACA449130.11716325158557647No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)