FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005396077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005396077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9070036
Sequences flagged as poor quality0
Sequence length28
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGCCTA175650.021.4919241
AGTTAGA173250.021.4342067
GTGTGAC233800.021.3264928
AGACTAG188200.021.321298
TCAACCA281650.021.3197238
TTAGAAC177150.021.3162549
TAGAACA177450.021.29261410
TGTGACC231850.021.292379
TGCCTAA171650.021.2620142
CGTCCAT220300.021.2514131
CTACCCA235150.021.2428871
GCCTCCA223950.021.2385485
GTGACCC232350.021.23234710
TACCCAG233050.021.2124122
CCCAGTG231350.021.2010884
CCTTAGA111500.021.2007734
ATTAGGA191650.021.184855
ATTCAAC215850.021.1743056
AGAATAG149350.021.1657241
TGATTTC83400.021.1612361
Produced by FastQC (version 0.11.5)