Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005396425 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14010440 |
Sequences flagged as poor quality | 0 |
Sequence length | 28 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGCGAT | 5645 | 0.0 | 19.569063 | 1 |
ACTGAAC | 5075 | 0.0 | 19.27374 | 1 |
GAATAAG | 5825 | 0.0 | 19.266575 | 1 |
AGCTTGA | 4675 | 0.0 | 19.016476 | 1 |
GTAACTG | 6245 | 0.0 | 18.851748 | 1 |
GATGCTA | 5415 | 0.0 | 18.795053 | 1 |
AGAATGT | 5385 | 0.0 | 18.771873 | 8 |
ACTGATG | 4975 | 0.0 | 18.754395 | 1 |
GAATGAA | 4565 | 0.0 | 18.655224 | 1 |
GACTAAC | 4360 | 0.0 | 18.62388 | 1 |
ACGATGT | 7710 | 0.0 | 18.59475 | 1 |
AGTGAAC | 3465 | 0.0 | 18.570791 | 8 |
GCCGACA | 2945 | 0.0 | 18.564621 | 3 |
TCTGGAA | 5280 | 0.0 | 18.462908 | 1 |
TATGCCC | 5760 | 0.0 | 18.35698 | 1 |
GCATGCG | 6335 | 0.0 | 18.323402 | 1 |
TGACTAG | 4800 | 0.0 | 18.26911 | 1 |
ACGAGGA | 4010 | 0.0 | 18.246414 | 1 |
CGCTTCA | 4185 | 0.0 | 18.219566 | 1 |
TGATTTC | 4205 | 0.0 | 18.13291 | 1 |