Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005396755 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 167824055 |
Total Bases | 1.3 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGGCCCGA | 56276817 | 33.533224423638195 | No Hit |
CCAAGATG | 39498717 | 23.53578990806771 | No Hit |
TACGTGAC | 36781892 | 21.916936758559434 | RNA PCR Primer, Index 17 (100% over 8bp) |
GTTTATCT | 33869756 | 20.181705179272424 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)