Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005396859 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26584471 |
Total Bases | 212.6 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCGCTTCG | 8742089 | 32.88419393412041 | No Hit |
CGTGCAGA | 6539860 | 24.600301431613968 | No Hit |
GTATGCTC | 5674045 | 21.343456486307364 | No Hit |
AACAAGAT | 4963332 | 18.67004237172897 | No Hit |
CATGCAGA | 234642 | 0.8826280575603704 | No Hit |
AACCAGAT | 111679 | 0.4200911125897521 | No Hit |
TCGCTTCA | 35443 | 0.13332219399814274 | No Hit |
AACACGAT | 30297 | 0.11396502868159385 | No Hit |
GTATGCTA | 27371 | 0.10295860316347841 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)