FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399527

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399527
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32923
Sequences flagged as poor quality0
Sequence length76
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCGCC150.00220588269.9984816
CGGAAGG200.006893056452.4988659
GAATGGC200.006893056452.4988625
TGTGCAT200.006893056452.4988612
GATGGCC200.006893056452.4988613
TGTTCAT200.006893056452.4988633
TGAGGCG200.006893056452.4988615
GCATGGT400.002385805134.9992413
GAGGCGG500.00711136327.99939216
CTGGGAT657.796315E-426.92249310
GCTGGGA700.001201558424.9994589
GGCTGAG950.007067315718.42065212
Produced by FastQC (version 0.11.5)