FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14586232
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACCTGG58650.017.6004961
GACTAAC50700.017.4009861
CGATTGA47500.017.0781361
ACGAGCC55150.017.0670051
GACCAAT52450.016.9348261
TTTGCGC47750.016.8839821
CTGAAGT52300.016.8495181
GGGCATC44850.016.7490711
TGACGGC42350.016.7458061
TACGGGC53850.016.68031
CGACCTT53800.016.6586191
TTGACTT52600.016.6393181
CATGGCG46500.016.5849691
CGGACGT45400.016.5681951
CGATGGC42150.016.5404931
TGGGCGT33200.016.5103281
CGCTTCA43450.016.506031
ATCGAGT36600.016.4797061
ATATCCG40050.016.45449310
CATCGAA41600.016.4225521
Produced by FastQC (version 0.11.5)