FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15789617
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGACC52000.017.330241
CCGGGAT46050.017.3105891
CAATGGA60500.017.3039468
ATGCGAT49250.017.2824971
CCGAATT52200.017.2589210
GGGACCT46650.017.2380281
TGACGGC54600.017.2377321
CAACTAG69300.017.1317061
CGGACTG42450.017.0821861
CACCGAA36300.017.0505318
TACGGGC75250.017.0398061
GCGCGAT35050.017.0360721
GCGCAAC57500.017.0119531
CCGTGGA41800.016.7017611
ATAACGC47950.016.6246641
GACCTGG48750.016.6185671
AGAGTGG67400.016.5907141
GACCAAT42850.016.5726011
CCACCTA62150.016.5598891
CTCGAAA41400.016.5490631
Produced by FastQC (version 0.11.5)