FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15329951
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT49200.018.1148511
GACTAAC64400.018.1106851
GCCTCTA95950.017.8372231
ACTGATG40450.017.5822011
CCGGGAT39900.017.273031
GACCTGG55450.017.2636471
ATGCGAT42350.017.218541
ACGAGCC44500.017.0834581
ACGAGGA49450.017.052321
CCCTCCT70400.016.780291
TTGACTT62500.016.740711
CGAGCAC37550.016.6757971
GGAACTT50800.016.658231
TGACGGC45150.016.6381241
GGGAATG47750.016.5491581
CGCTGGA40900.016.5083121
ATTGGAC59450.016.4722541
ACTTGAC37900.016.4630510
TTGCCGT69400.016.459961
TGCTACC46100.016.3386541
Produced by FastQC (version 0.11.5)