FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14752097
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTAAC51350.017.4736631
GACCTGG57150.017.3631061
AGACGTT64050.017.2417741
ACGAGCC57100.017.0804961
TTTGCGC50400.017.068681
CGACCTT58000.016.8327031
TACGGGC56600.016.7895551
GGGCATC44550.016.7727741
GACCAAT51300.016.7692281
CGATTGA51650.016.7524281
CCGGGAT32200.016.7131521
TGACGGC44350.016.7130831
TGGACGC42750.016.6600341
CGGACGT47150.016.632841
ATATCCG40700.016.60802310
CTGAAGT51950.016.5786671
GAAATGA45750.016.5733411
TGACTAG41100.016.5500411
CATGGCG45350.016.5210081
GCGCGAT25100.016.4193331
Produced by FastQC (version 0.11.5)