FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16712585
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAC58250.017.8413831
TACGGAT68500.017.6102541
CCGGGAT56150.017.4398141
GGGAATG58950.017.4089451
GCGCGAT34900.017.339591
CAATGGA73000.017.3011538
GGAACTT67350.017.2574831
CGTTAGA58450.017.2327211
GACTAAC58300.017.1912751
AGATTGC63200.017.1403731
GGGACCT55750.017.026691
ACCCACT63500.017.0121381
GAAATGA76800.016.8792321
ACGAGGA51950.016.8665961
CGTGAGA35400.016.80764810
CCTTACG53400.016.7832341
CCACCTA61950.016.759651
CCACGGA78600.016.6581211
CGGAGCT51550.016.6288051
TGGGCGT38850.016.606481
Produced by FastQC (version 0.11.5)