FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15407094
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGAGC55150.017.7563151
CGGACTG55200.017.6315061
TGCTACC53050.017.3656061
ATGCGAT47750.017.2401921
GGGCATC52900.017.1690331
CACACAA62650.017.1314581
GGATTAC59800.017.0781271
AGATTGC55350.017.0777191
ATAACGC58400.017.0250821
CGACCTT58850.016.9458891
CTTAGGA51850.016.9379731
GACTAAC46550.016.9325431
GGAACTT53000.016.9290371
AGTGAAC48300.016.8940288
CCCTCCT76100.016.8244531
ACACCCT51700.016.8129881
ACTGAAC42900.016.8110031
GTCCGAA48100.016.7771688
CAATGGA58800.016.7513228
GCAGTTA53750.016.6369881
Produced by FastQC (version 0.11.5)