FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15125885
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCTCTA101250.017.970221
GACTAAC65200.017.9188841
GCGCGAT47750.017.617261
ATGCGAT42500.017.5105481
GACCTGG57850.017.3252741
CCGGGAT38550.016.8916591
GGAACTT49200.016.8744141
ACTGATG39150.016.862731
CCCTCCT68950.016.7847461
CGGACTG36250.016.749291
TAGAATG43500.016.712187
ACGAGGA53750.016.711431
GGGAATG46500.016.692621
GAATGAA42850.016.6205311
TGACGGC42100.016.583991
CAATGGA43050.016.5617878
ACCCACT42400.016.5610161
CGAGCAC35150.016.505111
ATCGAGT40350.016.4356061
TTGACTT65950.016.4107421
Produced by FastQC (version 0.11.5)