FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15819794
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGATG64950.017.9109781
ATGCGAT50500.017.8068491
TAGTTGG66350.017.8044171
ATGGCGC46800.017.5210632
TGATTTC67800.017.2613561
GGTATTG69500.017.0838071
CATGGCG79150.017.0735241
ATAGACC39950.016.9007421
TGGACGC44250.016.818161
CCTCTGA65900.016.8179511
GAAGATT38600.016.7870089
AGGCGAC35750.016.7828718
CGACCTT52750.016.7439161
GACTAAC44150.016.7203121
CGGAGCT52000.016.7161081
GAACCTA53500.016.658761
CCGGGAT39150.016.63291
CGAGCAC44150.016.5617181
TACACGA63800.016.5562521
CTTTGCG48400.016.5541111
Produced by FastQC (version 0.11.5)