FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16945474
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGGAT67550.017.8136941
GGGACCT55850.017.6769621
GACTAAC55600.017.6485041
CTAAGAC58650.017.481131
CCGGGAT58550.017.3743171
CAATGGA78100.017.3221918
CGGAGCT50850.017.2906631
GGAACTT67050.017.2752151
AGATTGC64250.017.2340831
GCGCGAT33850.017.2275521
GGGAATG60450.017.2253531
CGTTAGA59500.017.1977791
ACGAGGA56200.017.1753141
GATGCTA50150.017.0333711
TGAGCCG40650.016.9047951
ACCCACT69100.016.7916581
CCGTGGA40350.016.7825831
GAAATGA72600.016.7399181
CCACGGA82400.016.6669851
TTGACTT81800.016.6669541
Produced by FastQC (version 0.11.5)