FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16051743
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAGACC50500.017.797651
GGGACCT48400.017.4957431
CGGACTG44600.017.4845331
CCGGGAT47300.017.3953441
GCGCGAT36800.017.224071
TGACGGC55450.017.1824721
CAATGGA66200.017.1242498
ATCGAGT37650.017.0741981
CCGAATT51050.017.05643810
ATGCGAT48050.016.9989831
TACGGGC72700.016.9697361
GCGCAAC60950.016.9277921
TATTGAG36750.016.7561573
CAACTAG72550.016.7429961
GTCGACT32700.016.6917298
ACTGATG39200.016.6286051
CACCGAA36500.016.5698628
GACCTGG51250.016.5618231
CCCTCCT71750.016.5395281
AACCGCG62900.016.5142651
Produced by FastQC (version 0.11.5)