FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15924177
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT47350.017.3853911
ATAGACC53850.017.367231
CCGGGAT48150.017.3458181
ATGCGAT48050.017.3402841
CGGACTG44150.017.3088131
TACGGGC78300.017.2583081
CAATGGA68100.017.253758
CCGAATT51500.017.2425410
CACCGAA37400.017.1387528
ATCGAGT39450.017.0890311
CAACTAG68800.016.9662951
GTCGACT33650.016.909088
GCGCGAT37500.016.8840681
TGACGGC54400.016.8790661
AACCGCG63950.016.8609811
GCGCAAC57600.016.792241
GGCTGGT57800.016.6995241
CTCGAAA42750.016.682381
GGGAATG42400.016.6313651
GACCTGG52200.016.5940341
Produced by FastQC (version 0.11.5)