FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14681635
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACCTGG57750.017.4324111
AGACGTT65550.017.2034821
GGGCATC46700.017.190111
GACTAAC51750.017.1353591
ACGAGCC59100.016.983461
CGATTGA45600.016.9032211
TACGGGC55900.016.8647461
GACCAAT51750.016.8262651
CGACCTT61100.016.8202271
TTTGCGC47750.016.7492961
TGACGGC40850.016.6906131
CTGAAGT53250.016.6526741
ATATCCG40850.016.5678510
CCGGGAT33250.016.5367811
CCGGTAG32600.016.467841
ATAGACC25150.016.4566821
GAAATGA47550.016.4413011
CATGGCG48700.016.4225651
TCGGTAA52650.016.3867341
CTGCCTA44250.016.3796521
Produced by FastQC (version 0.11.5)