FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15288610
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT48400.017.7716921
CGTGAGC53350.017.6975561
CGGACTG51500.017.4399341
ATAACGC56800.017.4150091
GGATTAC57150.017.1683461
AGTGAAC50500.017.1468498
CTTAGGA49950.017.1000791
TGGCTGG56400.017.0951791
GGGCATC54750.017.0623361
GACTAAC45100.016.9652631
CGACCTT55450.016.8289031
CCCTCCT73200.016.8198721
GTCCGAA48650.016.8123448
ACTGATG41400.016.7903671
TGCTACC50050.016.7261921
ACTGAAC41250.016.7059421
AGATTGC52100.016.7015691
CAATGGA59650.016.6622548
CACACAA62200.016.6427731
ACACCCT53300.016.5131991
Produced by FastQC (version 0.11.5)