FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005399763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005399763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30392152
Sequences flagged as poor quality0
Sequence length35-100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAAT403950.06.11676741
CTTAAAT167000.05.2563381
TTTACGC18202.2180631E-55.1026847
AATCTAG84800.05.0931755
Produced by FastQC (version 0.11.5)