FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005402312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005402312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16904418
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGGAAGAGACTTTATTTGGCCCCAGCCCCTAGCCCCACAGCCAAGACA217360.1285817707536574No Hit
GAGGTATTGATGACTTTATTATTCTGCAGGTACATGTCCAGGGGCCCAGC199570.11805789468764911No Hit
GCAGGTACATGTCCAGGGGCCCAGCCTCTGGGCCCAGTAACTCAGCTACT198980.11770887350277306No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)