FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39747822
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC98150.0110.271655
CGACGCT97500.0109.891526
CACGACG102650.0106.214364
GACGCTC125750.086.1246957
ACACGAC133350.082.033583
TACACGA136050.080.778562
CTACACG139900.079.2876361
ACGCTCT145800.073.585278
CGCTCTT172250.062.3267339
CCGATCT160700.020.6847611
CGCCGTA760500.019.93657360-64
TCGCCGT769700.019.61163360-64
GCCGTAT775900.019.45305460-64
CGTATCA781350.019.14907665-69
GTCGCCG788700.019.13918560-64
TGGTCGC812900.018.62470455-59
CCGTATC782250.018.47094265-69
GTGGTCG832400.018.30160555-59
GGTCGCC809600.017.94134360-64
TCTCGGT885650.017.35506250-54
Produced by FastQC (version 0.11.5)