FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27367693
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC110000.0123.237645
CACGACG113950.0119.411024
CGACGCT113800.0118.230676
GACGCTC129050.0104.313677
CTACACG135950.0101.4944151
ACACGAC135400.0100.976023
TACACGA138450.099.170812
ACGCTCT142350.094.567818
CGCTCTT165600.081.420169
TCCGATC138650.018.84354815-19
TTCCGAT149250.017.952810-14
ACCGACG14550.017.6082041
CTTCCGA156000.017.52918210-14
TCTTCCG167050.016.2828710-14
CCGATCT166000.015.93978915-19
CGTCGAC9800.015.53418353
CGCCGTA311750.015.35581460-64
TCGCCGT316550.015.04052760-64
GCCGTAT320150.014.9257460-64
CGTATCA323650.014.65284865-69
Produced by FastQC (version 0.11.5)