FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28520794
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC131750.0123.031175
CACGACG135450.0120.3126454
CGACGCT137850.0117.113646
ACACGAC156200.0104.515843
CTACACG158500.0104.026761
GACGCTC155750.0103.698947
TACACGA165100.099.2770842
ACGCTCT170900.094.6334468
CGCTCTT192600.084.1574869
CGACGTC15250.019.0144656
TCCGATC166500.018.98293515-19
TTCCGAT176100.018.43444310-14
CTTCCGA184550.017.91249310-14
CGGACCG14500.016.9982786
GACCGAT28050.016.5399538
TCTTCCG200350.016.52882610-14
CCGATCT193800.016.51834115-19
CGCCGTA325300.016.42746260-64
TCGCCGT326850.016.18100760-64
GCCGTAT333250.016.07907160-64
Produced by FastQC (version 0.11.5)