FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25786956
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGTA231400.0139.087331
ATTCGCG122350.0136.532932
CGGTTCG126100.0135.524
CCGTACT225750.0131.996981
TAACGCG120450.0131.265729
TATAGCG214950.0129.760835
GTACGTA277450.0128.996551
AGGCGAC223400.0128.341118
GCGGTCG79600.0128.15632
GGCTACG181350.0128.078869
TACTCGC131250.0127.891261
CGGTGCG95050.0127.751269
CGCTCCG111200.0127.663525
CGGTTAA269150.0127.52431
CGGTCGT81600.0127.503073
CCGGTCG72800.0127.08035
AACCGCG74900.0126.182841
GGTAACG206700.0125.0321047
ATAGCGA223650.0124.476796
AATCGGT251900.0124.1466451
Produced by FastQC (version 0.11.5)