FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24103721
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCGCG162700.0137.177061
CGCCGAA131450.0136.572392
TTGCGCG142950.0136.389052
CGTACGT119900.0136.213247
TTACGCG89150.0136.116719
ACGTACG120000.0136.039326
CGGGTCG283250.0135.997454
CGCGATA137600.0135.948412
ACGATCG154250.0135.722294
GTACGCG116100.0135.614148
TACGCGA112250.0135.422069
GCCGCGT184100.0134.81123
TCGGTCG126600.0134.559174
ACGCCGA138550.0134.125471
CGTTACG90950.0132.785197
CGCAACA379100.0132.694632
GTCGCGA81850.0132.669317
TACGTCG78600.0132.650592
GCGGTCG121200.0132.149632
ACGTCCG156850.0132.132235
Produced by FastQC (version 0.11.5)