FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24103721
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC157850.0126.475655
CACGACG159200.0125.676364
CGACGCT158550.0125.414326
CTACACG175750.0115.4599841
ACACGAC178850.0112.3548663
TACACGA182500.0110.8528752
GACGCTC179650.0110.473887
ACGCTCT192850.0102.850328
CGCTCTT211550.093.657989
CTTCCGA210850.019.4474910-14
TCCGATC202800.019.39021315-19
CGAACGT13500.019.3295657
TTCCGAT214100.019.04392410-14
TCTTCCG217250.018.80116810-14
CCGATCT229950.017.4413315-19
CCGATCG13450.017.2470686
ACGAACG16200.016.1092416
CGATCGT14500.015.4969787
CGATCTA70350.014.30395715-19
CGACGTA11501.8189894E-1212.6081219
Produced by FastQC (version 0.11.5)