FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26092343
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGTA226250.0138.845061
CGGTTCG129450.0136.691834
ATTCGCG125350.0136.331732
TAACGCG121300.0132.847879
TATAGCG214800.0131.278065
CCGTACT224500.0131.202261
AGGCGAC227100.0129.689748
CCGGTCG75100.0129.535685
CGGTCGT79950.0129.409823
CGGTTAA273450.0129.152131
GTACGTA279450.0128.654591
AACCGCG75900.0127.881851
TACTCGC133500.0126.523531
GGTAACG207200.0126.33217
CGCTCCG112550.0126.043995
GCGGTCG81500.0125.7921452
GGCTACG184950.0125.2254269
AATCGGT254400.0124.659441
ACGGTCC140150.0124.497254
CAAGCCG184950.0124.284769
Produced by FastQC (version 0.11.5)