FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41308397
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC118150.0110.6849065
CACGACG120350.0108.721954
CGACGCT119350.0108.3569956
CTACACG150100.089.139471
GACGCTC146050.088.788247
ACACGAC150900.087.4315643
TACACGA153950.086.00642
ACGCTCT168850.076.895818
CGCTCTT198450.065.574939
TTCGCGA14750.021.1390822
CGCCGTA863700.020.40209460-64
TCGCCGT868150.020.1973260-64
GCCGTAT878450.019.96380460-64
CGTATCA881200.019.81865565-69
GTCGCCG888800.019.74600860-64
TGGTCGC914450.019.19482455-59
CCGTATC882500.019.04854665-69
GTGGTCG937050.018.84637555-59
CGCGAAA20400.018.698171
GGTCGCC911500.018.50673160-64
Produced by FastQC (version 0.11.5)