Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005403500 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26685132 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAACGCG | 19065 | 0.0 | 136.15582 | 9 |
TAGCGCG | 11945 | 0.0 | 135.38861 | 7 |
ACGCCGA | 14945 | 0.0 | 135.14265 | 1 |
GTCCGCG | 15880 | 0.0 | 134.38661 | 7 |
GACGCGT | 13750 | 0.0 | 134.34145 | 1 |
CGCCGAA | 14510 | 0.0 | 133.61783 | 2 |
TACTCGC | 16525 | 0.0 | 133.19157 | 1 |
TCGCGCA | 12895 | 0.0 | 133.09058 | 3 |
TGTCGCG | 11100 | 0.0 | 132.63423 | 7 |
GCGTTCG | 12660 | 0.0 | 131.63579 | 4 |
TCCGCGG | 16295 | 0.0 | 131.49788 | 8 |
CGGACGT | 11435 | 0.0 | 131.17427 | 1 |
AATCGGT | 25455 | 0.0 | 130.83324 | 1 |
CGTAACG | 11480 | 0.0 | 130.20134 | 7 |
AGCGCGT | 12455 | 0.0 | 129.49559 | 8 |
CGGGCTA | 25470 | 0.0 | 129.09778 | 2 |
GCGCGTC | 12535 | 0.0 | 128.72697 | 9 |
TAGTCCG | 16645 | 0.0 | 128.64572 | 5 |
ACGCGTT | 13975 | 0.0 | 128.25287 | 2 |
CGACACG | 9365 | 0.0 | 127.94808 | 5 |