FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37643561
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCGCG110150.0122.510441
GCGCAAC176000.0120.919271
CGGACGT115850.0120.514591
TACGGGC248750.0120.410671
TTACGCG89700.0118.4812249
TTGCGCG60500.0118.2089842
TCGGTCG76800.0117.32222
ACGCCGA134950.0117.248441
TCCGCGA62900.0116.867928
CTTACCG150350.0116.063811
AACGTCG52500.0115.433365
CGTTACG41200.0115.077017
TTCGGTC183100.0114.7954941
CGCCGAC95850.0114.229662
CCTTACG146850.0113.313481
GACGTTA172300.0112.7993551
CGCGGTA71050.0112.478811
TTTGCGC149700.0111.643741
GTCGCCG76850.0110.181079
GTTACGC98450.0108.392728
Produced by FastQC (version 0.11.5)