FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80041321
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCCGAT775650.0130.430761
CGCGGTA289900.0130.15161
GTCGCGT297650.0128.93658
GCCGATA505650.0128.342122
CCGATAG504100.0128.118363
GTCGTAC521050.0128.025769
CGGTCGC296400.0127.865866
TAGCGCG193600.0127.761777
CTTCGAC546600.0124.64166
CGTCGAC169050.0124.102526
AGGTCCG554950.0124.0007861
GGTCGCG306100.0123.956027
TCGACAA857250.0123.6592948
ATCCGCG137300.0123.1275567
GCGGTCG306750.0123.1030045
AATCGGT556150.0122.958251
GATCGTA501450.0122.356581
TTTGCGC408450.0121.778851
CGGATCG246950.0121.472714
ACGCGTA179000.0120.889484
Produced by FastQC (version 0.11.5)