FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12167498
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGTA108550.0139.41431
ATTCGCG55400.0138.969362
CGGTTCG60750.0134.12844
TAACGCG55300.0132.925469
CCGTACT105900.0131.310641
TATAGCG101450.0131.124775
CGGTCGT37550.0131.088353
AGGCGAC109650.0129.383648
GTACGTA131850.0129.353381
CGCTCCG56150.0127.945385
TACTCGC65350.0127.807891
CGGTTAA129750.0127.2793961
AATCGGT119400.0126.5007861
GGTAACG99400.0125.805577
GGCTACG87850.0125.59389
GCGGTCG39100.0125.150132
CAAGCCG86200.0124.7180259
ATAGCGA106850.0124.632636
CCGGTCG38100.0124.628415
TATCGAC63650.0124.485536
Produced by FastQC (version 0.11.5)