FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98784853
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCGA376300.0134.75639
TACTCGC770350.0133.905471
GTCGCGT414950.0132.006158
CGCGTTA392150.0131.993042
GTACGCG405000.0131.096578
CGATTCG373200.0130.2834
CGGACGT520000.0130.113511
TCGTTCG396800.0129.91438
CCGATAG671300.0129.654243
GATCGTA811750.0128.588011
CGATTGA954650.0128.324571
CGGTCCG337900.0128.210665
CGGTACG218700.0127.551316
TCGTACG254800.0127.347176
CGTCGAC217550.0126.726046
TAGGTCG604200.0126.557557
GGCTCGA1181700.0126.2814561
AACGTCG218250.0126.253874
TGTCGCG304000.0125.43277
GGCCGAT715600.0125.3877261
Produced by FastQC (version 0.11.5)