FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60735522
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC235250.0117.444915
CGACGCT234600.0116.936226
CACGACG238050.0116.188194
ACACGAC281000.098.737963
GACGCTC279300.098.169587
CTACACG286850.097.034551
TACACGA291750.094.926242
ACGCTCT303750.089.815598
CGCTCTT360600.075.776449
TCCGATC283950.018.6894115-19
TTCCGAT314200.017.52221710-14
CTTCCGA321650.017.30119310-14
CCGATCT342650.015.79236815-19
TCTTCCG353600.015.77892610-14
CGCCGTA637750.015.53027160-64
TCGCCGT651850.015.08979560-64
GCCGTAT662250.014.91412860-64
CGACGTA26950.014.7957759
CGTATCA666850.014.7138265-69
GTCGCCG684700.014.40394860-64
Produced by FastQC (version 0.11.5)