FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80209795
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC335100.0120.722595
CACGACG338700.0119.463754
CGACGCT338750.0118.565826
ACACGAC390450.0104.223323
GACGCTC392000.0102.496677
CTACACG404400.0101.654971
TACACGA414600.098.554862
ACGCTCT428050.093.594558
CGCTCTT494150.081.324299
TCCGATC405100.019.37813815-19
TTCCGAT445300.018.0714910-14
CTTCCGA461850.017.72216210-14
TCTTCCG493800.016.64596710-14
CCGATCT482400.016.43528415-19
CGCCGTA931750.015.52711160-64
TCGCCGT949250.015.09575460-64
GCCGTAT958200.014.97744860-64
CGTATCA966050.014.87701265-69
GTCGCCG992100.014.56943560-64
CCGTATC968850.014.313210565-69
Produced by FastQC (version 0.11.5)