FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403556

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403556
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67120033
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACGCGT376150.0134.905091
CGCGGTA361500.0134.39031
CTCGTAC590100.0132.270461
CGCGATA253200.0132.020032
GTACGAC336600.0130.298089
ACGCGTA174450.0130.237612
GTTCGCG199850.0129.681128
GCTCGAC418150.0129.161362
TCGCGAG384900.0129.029161
CGTAGCG179350.0127.822181
CGTTCGC203300.0127.587317
ACGGGTC524600.0127.450741
TAACGCG159800.0127.157829
GCGCAAC407200.0126.932631
TCCGCGA176400.0126.5365458
ACGCGTC214500.0125.793292
ACCGTAA591350.0125.7273561
TTCGCGT202300.0124.453089
AGACGTT916400.0124.4515461
CGCTATC416500.0124.431631
Produced by FastQC (version 0.11.5)