FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174634509
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC443300.0112.182955
CGACGCT448750.0109.839196
CACGACG456150.0108.9114464
GACGCTC571600.087.056557
ACACGAC586200.085.2190863
TACACGA611500.081.990232
CTACACG614200.081.985921
ACGCTCT649450.075.917918
CGCTCTT793300.062.3069769
CGCCGTA3990200.020.1873160-64
TCGCCGT4030450.019.92275860-64
GCCGTAT4047750.019.81468460-64
CGTATCA4075000.019.62411765-69
GTCGCCG4101100.019.4978860-64
TGGTCGC4208650.019.0645255-59
CCGTATC4070850.018.8473965-69
GTGGTCG4301400.018.74275655-59
CCGATCT727100.018.6937771
GGTCGCC4186300.018.34050660-64
TCTCGGT4554550.017.85786850-54
Produced by FastQC (version 0.11.5)