FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28015610
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG60950.0134.154659
CTCGTAC165600.0130.049791
CGCGTTT138950.0129.18721
AACCGCG74100.0129.139071
AACGTCG67050.0129.065834
CGAATCG83550.0128.92874
CGAAGCG103650.0127.213659
CGTACGT90850.0127.112343
GCGGTCG100950.0127.024875
AGCGCGA96600.0125.8421868
CGCTCGA89550.0125.387155
ATCGACG46600.0125.377467
TTCGGTC153000.0124.798321
CGGGTCG98700.0124.066682
GCGACGT63850.0123.974429
GTTACGC105800.0123.874848
GACGGCT192600.0123.540481
CGTCCGA81150.0123.0030066
TCGGTCC149150.0121.8870852
CCGCTCG92900.0121.4964144
Produced by FastQC (version 0.11.5)