FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70588546
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGCGA355250.0128.750248
ACGCGAT353750.0128.640499
GTTCGGG588500.0127.320891
TCCGCGA189550.0127.265998
CGCGGTA269500.0127.126991
ACGGTCG143700.0125.609854
ATCCGCG174750.0124.8953867
GTCGACG118250.0124.559077
CATATCG433600.0124.367154
TTACGCG91900.0121.388059
TCGACGA140750.0121.178728
GTCCGAC195500.0120.760197
CGGTTAA432300.0118.8867951
CTTACCG303500.0118.574471
TTCGGGC407400.0118.488922
GGCGACT330300.0118.029291
TCGTCCG125350.0116.000386
TGCGATA405700.0115.283892
CGTAACG114550.0114.977447
TAACCGA351850.0114.667019
Produced by FastQC (version 0.11.5)