FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005403581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27613843
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC102800.0123.40585
CACGACG106250.0119.616434
CGACGCT107150.0118.261846
ACACGAC123800.0103.424933
GACGCTC125250.0101.113837
CTACACG127950.0100.95641
TACACGA133600.096.457512
ACGCTCT138500.091.4931648
CGCTCTT161950.078.510319
TCCGATC132400.018.63675115-19
TTCCGAT142850.018.0856910-14
CTTCCGA146600.017.71206510-14
TCTTCCG161100.016.10887110-14
GCGTACG8600.016.0217592
CCGATCT162000.015.43734915-19
CGCGTAC10100.015.2775331
CGCCGTA330900.014.30531760-64
CGTACGA9650.014.2751743
TCGCCGT331100.014.191586560-64
GCCGTAT339050.013.92296460-64
Produced by FastQC (version 0.11.5)