FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71097858
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGCGA353800.0129.344548
CGCGGTA273700.0127.794091
ACGCGAT357350.0127.6367659
TCCGCGA192050.0127.19968
ACGGTCG139650.0126.0991064
GTTCGGG603200.0126.066841
TTACGCG92500.0124.526859
CATATCG435600.0124.391494
ATCCGCG174500.0123.9161767
GTCGACG116750.0122.50127
GTCCGAC205350.0119.80847
TTCGGGC418450.0119.251572
TCGACGA139850.0118.95718
CTTACCG302500.0118.599481
CGGTTAA445250.0118.351761
TCGTCCG122100.0118.024146
GGCGACT330650.0116.925341
CGTAACG114600.0115.817417
CGCTATC311600.0115.323561
ACGCCGA155850.0114.770631
Produced by FastQC (version 0.11.5)