FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005403585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005403585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71097858
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC229250.0119.148875
CGACGCT232400.0117.285526
CACGACG233900.0117.0073854
ACACGAC282600.097.231383
GACGCTC287150.095.352237
CTACACG298900.092.7285161
TACACGA300750.091.698222
ACGCTCT320400.085.3892068
CGCTCTT375800.072.914469
ACGCGAC31950.022.4700782
CGCGACT36700.017.9768963
TCCGATC300450.017.73820515-19
CGCCGTA1050900.017.48497460-64
TCGCCGT1059900.017.21339260-64
TTCCGAT326250.017.07763710-14
GCCGTAT1075100.017.00104160-64
CGTATCA1088400.016.80725165-69
GTCGCCG1102200.016.68431960-64
GACGCGA41800.016.5241491
CTTCCGA340300.016.51740310-14
Produced by FastQC (version 0.11.5)