FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6323142
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTTG47050.021.727901145
GTACTAG12100.021.5715961
GTTCTAG28350.021.4828241
GTACTAA17200.021.0768991
GTCCTAG24800.021.0497041
GGTCTAG18550.020.7155821
GTATTAG19450.019.0114731
TGCCGTG54750.017.612694145
GTGCTAG25700.017.4913651
GTCTAGG22700.017.2477741
GTGCATA24200.016.7779081
GCCCTAG24000.016.6156221
GTCTTAG26750.016.5337431
GGTCTAA20600.016.1903321
GTATTAA35350.015.9981711
GTCTAGA22300.015.9314891
CTAAGCG7753.6379788E-1215.9047244
GTCCTAA21900.015.8914051
CTCCGAC32050.015.835373145
GGGGGGG2957950.015.72649145
Produced by FastQC (version 0.11.5)