FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8938639
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGACGC110250.030.374578145
CCGTATA15400.028.240826145
CGCCGTT16950.023.0925145
GTATTAG30250.021.3789671
GTTCTAG38150.021.1422181
GTCCTAG32850.020.3504771
GGTCTAG28850.019.6458551
GTACTAG17850.019.5400261
CGTGTAT20800.019.515135145
GACGACA36400.018.917734145
TTATACC70650.018.262268145
TCTAGAC34250.018.2189063
TTACGTT23550.018.15967145
GTACTAA28450.018.1341921
GTGCTAG34150.018.0863251
GTATTAA45300.017.9656091
GTATAGG21500.017.9126381
GTTCTAA40750.017.8317721
CTATACT31450.017.7547194
TAGATCG11200.017.474012145
Produced by FastQC (version 0.11.5)