FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8857441
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGACGC122850.026.133842145
CCGTATA14650.023.250643145
GTCCTAG34700.021.356521
CGCCGTT17250.021.006592145
TTACGTT22300.019.824383145
GTGCTAG36550.019.2816491
GTATTAG30350.019.1509841
TCTAGAC32800.018.3535423
GTCTTAG33700.018.3252031
TTATACC76350.018.224974145
CTAGACT29900.018.1852514
GACGACA37350.018.045422145
GGTCTAA30250.018.0134011
GTTCTAG39600.017.796571
GTCCTAA30500.017.6275391
GGCTTAG34750.016.726111
GCCCTAG32950.016.5373381
GTACTAA25550.016.2085341
GTATAGG23000.016.1102451
GCTCTAA39550.015.9820541
Produced by FastQC (version 0.11.5)