FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8061153
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAG17000.021.3217471
GTTCTAA39350.019.5282271
CGTCTTA21250.019.448328145
GTCTTAG32300.019.3017921
GTGCTAG33250.018.968341
GTCCTAG32300.018.6284731
GTTCTAG36850.018.4923481
GTATAGG21350.017.6566031
GTACTAA29300.017.3193721
CTGTACT62650.016.8946694
GTCCTAA27500.016.8713171
CGTCTTG36500.016.686022145
GTATTAG27950.016.5996861
GTACAGG58500.016.4815271
GGTCTAG24200.016.4758971
GGGGGGG3202200.015.76121145
GTATAGA31350.015.7243621
GTATTAA44400.015.511091
TGTACCG12700.015.4126715
GTATATG40500.015.2147771
Produced by FastQC (version 0.11.5)