FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8043807
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGACGC87450.029.673758145
CCGTATA12700.021.117737145
TTACGTT22150.020.289312145
GTACTAG15100.020.210451
GTATTAG25800.019.995961
CGCCGTT13450.019.940166145
GTCCTAG32150.019.6626451
GTATTAA46250.019.3239971
CTGCCGC162700.018.399746145
GACGACA32300.017.952991145
GTTCTAA41350.017.9237271
TTATACC62750.017.90471145
GTGCTAA32000.017.711211
GTCTTAG30500.017.3910851
GTACGCG6303.45608E-1117.300331
GTACAAG49500.016.8809281
GTATAGG23350.016.8039171
GTATATA50350.016.5959471
GCCGACC32400.016.331543145
GCCCTAG29850.016.0658321
Produced by FastQC (version 0.11.5)