FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8198202
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAG15900.019.611091
CGTCTTA19100.019.357445145
GTCCTAG30550.019.2266751
GTACTAA22700.018.8476241
GTATTAA42000.018.3015121
GTGCTAG29050.017.2239741
GTATAAG27250.017.0311471
GTCCTAA28200.016.9716971
GACGTAT15450.016.892162145
CTCCGAC34300.016.69722145
GTACATA37550.016.608061
GTTCTAG38050.016.58041
GGTCTAA26800.016.5053791
CTATACT32200.016.4394324
GTCTTAG29200.016.3904741
GTATAGA29700.016.114541
GTTCTAA40550.016.094671
GGGGGGG3351150.015.253449145
CTAGACT28100.015.2252874
GTATTAG25850.015.1482911
Produced by FastQC (version 0.11.5)