FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005404745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005404745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8251805
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACTAG14550.027.9604361
CGCCGTT14650.023.74451145
GTACTAA26800.020.3303741
CCGTATA12900.020.224249145
GTGCTAG33400.020.0106071
GTCCTAG35050.019.2758621
GTATTAG28450.018.8959311
GTATTAA44800.018.4861181
CTGCCGC166400.017.856245145
GTTCTAG39300.017.7458821
GTGCTAA33400.017.6180341
GTATATA50650.017.4984381
GTCCTAA27850.017.2162131
CGACGAA20750.017.11345145
GTATATG43450.016.886921
GTACTAT23700.016.8590551
CTAGACT27550.016.8399854
CCTCTAG51550.016.6292341
TACTAGG20700.016.483362
GTACTGA42950.016.2377911
Produced by FastQC (version 0.11.5)